|
A preliminary selection analysis of the South African V501.V2 SARS-CoV-2 clade
|
|
0
|
8247
|
December 29, 2020
|
|
Selection analysis identifies significant mutational changes in Omicron that are likely to influence both antibody neutralization and Spike function (Part 2 of 2)
|
|
0
|
7868
|
December 5, 2021
|
|
Resurgence of SARS-CoV-2 19B clade corresponds with possible convergent evolution
|
|
2
|
4332
|
February 18, 2021
|
|
Phylodynamic analysis of nCoV-2019 genomes – 29-Jan-2020
|
|
3
|
21016
|
January 31, 2020
|
|
Phylodynamic analysis of a densely sampled COVID19 outbreak in Weifang, China
|
|
0
|
7352
|
March 10, 2020
|
|
Phylogeography with whole genomes 24 Mar 2020
|
|
0
|
7258
|
March 24, 2020
|
|
B.1.258∆, a SARS-CoV-2 variant with ∆H69/∆V70 in the Spike protein circulating in the Czech Republic and Slovakia
|
|
1
|
27975
|
February 11, 2021
|
|
Whole-Genome Sequence of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) obtained from a South African Coronavirus Disease 2019 (COVID-19) Patient
|
|
0
|
39139
|
April 1, 2020
|
|
A Monkeypox virus genome from a second Belgian case
|
|
0
|
6704
|
May 23, 2022
|
|
Circulation of 21A (Delta) SARS-CoV-2 variant in Rio Grande do Sul, Southern Brazil
|
|
3
|
5946
|
October 5, 2021
|
|
Electron microscopy and a sequence-independent, single-primer amplification (SISPA) viromics approach for monkeypox virus genome determination
|
|
0
|
6629
|
September 14, 2022
|
|
Spike protein mutations in novel SARS-CoV-2 ‘variants of concern’ commonly occur in or near indels
|
|
2
|
21412
|
April 17, 2022
|
|
Preliminary report on genomic epidemiology of the 2024 H5N1 influenza A virus outbreak in U.S. cattle (Part 1 of 2)
|
|
3
|
18485
|
May 8, 2024
|
|
Seasonal CoV & SARS CoV Live Full-Genome Builds
|
|
2
|
6695
|
January 28, 2020
|
|
SARS comparison
|
|
1
|
4465
|
February 3, 2020
|
|
Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: Insights from linking epidemiological and genetic data
|
|
1
|
24455
|
December 30, 2020
|
|
Detection of the B.1.1.7 and B.1.351 SARS-CoV-2 variants in Bangladesh
|
|
0
|
5873
|
March 26, 2021
|
|
Serratus: The ultra-deep search to discover novel coronaviruses
|
|
7
|
11337
|
October 11, 2021
|
|
Genomic Surveillance of SARS-CoV-2 in the State of Rio de Janeiro, Brazil: technical briefing
|
|
7
|
11318
|
September 3, 2021
|
|
Omicron is a Multiply Recombinant Set of Variants That Have Evolved Over Many Months
|
|
1
|
22434
|
January 29, 2022
|
|
Phylogenetic analysis of SARS-CoV-2 in DRC
|
|
0
|
5571
|
July 17, 2020
|
|
Emergence of a novel reassortant Oropouche virus drives persistent outbreaks in the Brazilian Amazon region from 2022 to 2024
|
|
1
|
12443
|
July 24, 2024
|
|
Spike protein sequences of Cambodian, Thai and Japanese bat sarbecoviruses provide insights into the natural evolution of the Receptor Binding Domain and S1/S2 cleavage site
|
|
1
|
21951
|
May 25, 2021
|
|
Two draft Canadian monkeypox virus (MPXV) genomes, June 2022
|
|
0
|
5517
|
June 21, 2022
|
|
Evolutionary & epidemiological analysis of 93 genomes
|
|
1
|
11817
|
February 27, 2020
|
|
SARS-CoV-2 diversity in Uganda, December, 2020
|
|
2
|
9504
|
January 6, 2021
|
|
Zika virus protein structure homology modelling
|
|
8
|
9410
|
February 10, 2016
|
|
Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2
|
|
0
|
27933
|
January 13, 2021
|
|
The ongoing evolution of variants of concern and interest of SARS-CoV-2 in Brazil revealed by convergent indels in the amino (N)-terminal domain of the Spike protein
|
|
3
|
13826
|
April 28, 2021
|
|
Assessing evolutionary pressures on the SARS-CoV-2 Mu (B.1.621) clade
|
|
0
|
4368
|
October 8, 2021
|
|
2019 Lassa virus sequencing in Nigeria - 23 additional sequences
|
|
0
|
4269
|
March 12, 2019
|
|
2018 LASV sequencing, continued
|
|
6
|
8981
|
April 17, 2018
|
|
Evidence Against the Veracity of SARS-CoV-2 Genomes Intermediate between Lineages A and B
|
|
0
|
23439
|
September 3, 2021
|
|
Testing recombination in the pandemic SARS-CoV-2 strains
|
|
0
|
4137
|
May 28, 2020
|
|
Mpox Clade Ib cases in Goma
|
|
0
|
3987
|
March 5, 2024
|
|
Phylogenetic evidence that B.1.1.7 has been circulating in the United States since early- to mid-November
|
|
0
|
22382
|
January 19, 2021
|
|
Guinea 2021 EBOV outbreak
|
|
0
|
21597
|
March 12, 2021
|
|
Integration of JBrowse 2 genome browser with Nextstrain
|
|
0
|
3835
|
March 16, 2021
|
|
Early analysis of 1,093 SARS-CoV2 intra-host variation datasets and comparison with sites under selection
|
|
2
|
6999
|
June 8, 2020
|
|
Wastewater samples CANNOT be used for genome assembly
|
|
7
|
7553
|
March 3, 2023
|
|
Report on Omicron Spike mutations on epitopes and immunological/epidemiological/kinetics effects from literature
|
|
0
|
20631
|
November 30, 2021
|
|
Phylodynamic estimation of incidence and prevalence of novel coronavirus (nCoV) infections through time
|
|
2
|
11781
|
February 14, 2020
|
|
Phylodynamic Analyses of outbreaks in China, Italy, Washington State (USA), and the Diamond Princess
|
|
1
|
14375
|
March 13, 2020
|
|
Assemblies of putative SARS-CoV2-spike-encoding mRNA sequences for vaccines BNT-162b2 and mRNA-1273
|
|
0
|
20322
|
March 24, 2021
|
|
First French draft genome sequence of Monkeypox virus, may 2022
|
|
5
|
8010
|
June 9, 2022
|
|
Identification of a novel SARS-CoV-2 Spike 69-70 deletion lineage circulating in the United States
|
|
1
|
13833
|
December 31, 2020
|
|
Selection analysis of GISAID SARS-CoV-2 data
|
|
3
|
9776
|
May 5, 2020
|
|
Pango Lineage Nomenclature: provisional rules for naming recombinant lineages
|
|
0
|
19379
|
March 17, 2021
|
|
Yellow fever outbreak in Nigeria 2018
|
|
2
|
6249
|
July 8, 2019
|
|
Preliminary: Origins of the 2018 Zika outbreak in India
|
|
7
|
6736
|
March 1, 2019
|