Virological

Topic	Replies	Views	Activity
Phylodynamic Analysis \| 176 genomes \| 6 Mar 2020 nCoV-2019 Genomic Epidemiology Phylogenetic analysis of nCoV-2019 genomes 6-Mar-2020 Andrew Rambaut, University of Edinburgh, Edinburgh UK [email protected] This is a brief report outlining a simple phylogenetic analysis of publicly shared genome…	17	153364	April 2, 2020
Initial genomes from May 2026 Bundibugyo Virus Disease Outbreak in the Democratic Republic of the Congo and Uganda Bundibugyo ebolavirus	0	618	May 18, 2026
Complete sequence of Orthohantavirus andesense virus: Swiss resident 2026 Hantavirus	17	10946	May 13, 2026
Experimental embedded trees for ANDV Hantavirus	1	1032	May 11, 2026
Preliminary analysis of Orthohantavirus andesense virus sequences from a cruise-ship related cluster, May 2026 Hantavirus	0	7501	May 10, 2026
Pathoplexus now supports the Andes variant of Hantavirus (ANDV) Hantavirus	0	745	May 10, 2026
Corrected Genome Sequence for Monkeypox Virus Strain Zaire-96-I-16 Genome Reports	2	479	January 26, 2026
Identification of a new Mpox virus lineage during the first occurrence of Mpox in Togo MPXV	0	226	January 25, 2026
NIH postdoc in virus evolution and spillover (new) Jobs and Opportunities	0	519	December 17, 2025
Genomic Evidence Links the Largest Dengue Outbreak in Senegal to Newly Circulating DENV-2 Lineage Dengue virus	0	639	December 17, 2025
Inter-Clade Recombinant Mpox Virus Detected in England in a Traveller Recently Returned from Asia MPXV	2	4235	December 8, 2025
Molecular characterization of Rift Valley fever virus from the 2025 outbreak in northern Senegal	0	1165	October 8, 2025
On the rooting of the Ebola virus phylogeny and its consequences for understanding the diversity in the reservoir Ebolavirus Evolutionary History	0	1154	September 8, 2025
The 16th Ebola Virus Disease Outbreak in Bulape Health Zone, Kasai, Democratic Republic of the Congo: A new spillover event from an unknown reservoir host Ebolavirus	0	7036	September 4, 2025
Phylogenetic analysis of initial genomes from Kasai EBOV outbreak, 8 September 2025 Ebolavirus	0	741	September 8, 2025
Detection of Mpox virus clade IIb from whole genome sequencing in Guinea, June 2025 MPXV	0	394	August 10, 2025
SARS-CoV-2 Spike displays multiple adaptive changes in addition to the furin cleavage site SARS-CoV-2 Molecular Evolution	3	2510	July 18, 2025
NIH Postdoc in Virus Evolution Jobs and Opportunities	0	537	June 18, 2025
Genomic epidemiology of Mpox virus in Sierra Leone Genome Reports	0	3838	May 28, 2025
Timing and molecular characterisation of the transmission to cattle of H5N1 influenza A virus genotype D1.1, clade 2.3.4.4b H5N1-global	1	12980	February 21, 2025
Near Real-Time Genomic Characterization of the 2025 Sudan Ebolavirus Outbreak in Uganda’s Index Case: Insights into Evolutionary Origins	0	18570	February 3, 2025
Fieldbioinformatics Updates Software	0	2889	January 13, 2025
Preliminary analysis of 98 genomic sequences of MPXV clade Ib cases from Burundi, July to September 2024 MPXV	0	4031	November 19, 2024
October 2024 Lassa virus introduced into Iowa, USA from Liberia Lassa virus	0	2801	November 18, 2024
APOBEC3 deaminase editing supports human-to-human transmission in escalating Mpox outbreaks of both Clade Ia and Ib in Kinshasa, Democratic Republic of the Congo, July-September 2024 Evolution	0	8017	October 22, 2024
Clade Ib Mpox in the Democratic Republic of the Congo (DRC): clinical and virological report of the first case in Kinshasa, the capital city MPXV	2	6221	September 10, 2024
Introducing Pathoplexus Software	0	3243	August 27, 2024
Draft genome of the first case of mpox virus detected in Kenya, August 2024 Evolution	0	3765	August 22, 2024
Preliminary analysis of full genome sequences of 58 MPXV clade Ib cases from Kamituga and Kamanyola, South-Kivu , DRC Evolution	1	5113	August 9, 2024
Preliminary report on genomic epidemiology of the 2024 H5N1 influenza A virus outbreak in U.S. cattle (Part 2 of 2) H5N1-global	1	14056	August 4, 2024

Phylodynamic Analysis | 176 genomes | 6 Mar 2020

nCoV-2019 Genomic Epidemiology

Phylogenetic analysis of nCoV-2019 genomes 6-Mar-2020 Andrew Rambaut, University of Edinburgh, Edinburgh UK [email protected] This is a brief report outlining a simple phylogenetic analysis of publicly shared genome…