Virological

Topic	Replies	Views	Activity
Phylodynamic Analysis \| 176 genomes \| 6 Mar 2020 nCoV-2019 Genomic Epidemiology Phylogenetic analysis of nCoV-2019 genomes 6-Mar-2020 Andrew Rambaut, University of Edinburgh, Edinburgh UK [email protected] This is a brief report outlining a simple phylogenetic analysis of publicly shared genome…	17	152966	April 2, 2020
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Genomic Evidence Links the Largest Dengue Outbreak in Senegal to Newly Circulating DENV-2 Lineage Dengue virus	0	580	December 17, 2025
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Molecular characterization of Rift Valley fever virus from the 2025 outbreak in northern Senegal	0	1152	October 8, 2025
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The 16th Ebola Virus Disease Outbreak in Bulape Health Zone, Kasai, Democratic Republic of the Congo: A new spillover event from an unknown reservoir host Ebolavirus	0	6874	September 4, 2025
Phylogenetic analysis of initial genomes from Kasai EBOV outbreak, 8 September 2025 Ebolavirus	0	712	September 8, 2025
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SARS-CoV-2 Spike displays multiple adaptive changes in addition to the furin cleavage site SARS-CoV-2 Molecular Evolution	3	2445	July 18, 2025
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Genomic epidemiology of Mpox virus in Sierra Leone Genome Reports	0	3819	May 28, 2025
Timing and molecular characterisation of the transmission to cattle of H5N1 influenza A virus genotype D1.1, clade 2.3.4.4b H5N1-global	1	12927	February 21, 2025
Near Real-Time Genomic Characterization of the 2025 Sudan Ebolavirus Outbreak in Uganda’s Index Case: Insights into Evolutionary Origins	0	18492	February 3, 2025
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October 2024 Lassa virus introduced into Iowa, USA from Liberia Lassa virus	0	2788	November 18, 2024
APOBEC3 deaminase editing supports human-to-human transmission in escalating Mpox outbreaks of both Clade Ia and Ib in Kinshasa, Democratic Republic of the Congo, July-September 2024 Evolution	0	8002	October 22, 2024
Clade Ib Mpox in the Democratic Republic of the Congo (DRC): clinical and virological report of the first case in Kinshasa, the capital city MPXV	2	6212	September 10, 2024
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Draft genome of the first case of mpox virus detected in Kenya, August 2024 Evolution	0	3762	August 22, 2024
Preliminary analysis of full genome sequences of 58 MPXV clade Ib cases from Kamituga and Kamanyola, South-Kivu , DRC Evolution	1	5110	August 9, 2024
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Emergence of a novel reassortant Oropouche virus drives persistent outbreaks in the Brazilian Amazon region from 2022 to 2024 Other Viruses	1	18107	July 24, 2024
Mpox Clade Ib cases in Goma MPXV	0	6585	March 5, 2024
Mpox virus resurgence in New York City, 2024 Evolution	0	4886	June 11, 2024
Preliminary report on genomic epidemiology of the 2024 H5N1 influenza A virus outbreak in U.S. cattle (Part 1 of 2) H5N1-global	3	28956	May 8, 2024

Phylodynamic Analysis | 176 genomes | 6 Mar 2020

nCoV-2019 Genomic Epidemiology

Phylogenetic analysis of nCoV-2019 genomes 6-Mar-2020 Andrew Rambaut, University of Edinburgh, Edinburgh UK [email protected] This is a brief report outlining a simple phylogenetic analysis of publicly shared genome…