Topic Replies Views Activity
Phylodynamic Analysis | 176 genomes | 6 Mar 2020
nCoV-2019 Genomic Epidemiology

Phylogenetic analysis of nCoV-2019 genomes 6-Mar-2020 Andrew Rambaut, University of Edinburgh, Edinburgh UK a.rambaut@ed.ac.uk This is a brief report outlining a simple phylogenetic analysis of publicly shared genome…

17 112201 April 2, 2020
Masking strategies for SARS-CoV-2 alignments
Software and Tools
15 9829 September 22, 2021
Tackling Rumors of a Suspicious Origin of nCoV2019
nCoV-2019 Evolutionary History
27 67619 September 15, 2021
High rate of mutational events in SARS-CoV-2 genomes across Brazilian
SARS-CoV-2 coronavirus
1 1256 September 10, 2021
Marburg virus sequence from Guinea, 2021
Marburg virus
0 1039 September 3, 2021
Evidence Against the Veracity of SARS-CoV-2 Genomes Intermediate between Lineages A and B
nCoV-2019 Genomic Epidemiology
0 8275 September 3, 2021
Genomic Surveillance of SARS-CoV-2 in the State of Rio de Janeiro, Brazil: technical briefing
nCoV-2019 Genomic Epidemiology
7 5554 September 3, 2021
Rapid molecular sequence characterization of the SARS-CoV-2 variant of interest Lambda (C.37)
SARS-CoV-2 Molecular Evolution
0 482 September 2, 2021
Emergence of lineage B.1.621 in Latin America and the Caribbean
SARS-CoV-2 coronavirus
1 4524 September 1, 2021
Circulation of 21A (Delta) SARS-CoV-2 variant in Rio Grande do Sul, Southern Brazil
SARS-CoV-2 coronavirus
2 1308 September 1, 2021
Faculty Position in Phylodynamics/Genomic Epidemiology at Fred Hutch
Jobs and Opportunities
0 391 August 27, 2021
RE: Proposal to redesignate B.1.631 as recombinant lineage XB
SARS-CoV-2 Molecular Evolution
0 661 August 25, 2021
Detection of potential new SARS-CoV-2 Gamma-related lineage in Tocantins
SARS-CoV-2 coronavirus
1 1392 August 15, 2021
SARS-CoV-2: don't ignore non-canonical genes
SARS-CoV-2 coronavirus
5 1864 August 14, 2021
Staff Scientist and Engineers / Scripps Research / San Diego CA or remote
Jobs and Opportunities
0 525 August 9, 2021
The molecular clock of variants of concern
SARS-CoV-2 Molecular Evolution
3 2821 August 7, 2021
Emergence of Y453F and Δ69-70HV mutations in a lymphoma patient with long-term COVID-19
nCoV-2019 Genomic Epidemiology
4 20692 August 7, 2021
Genomic surveillance tracks the first communitary outbreak of Delta (B.1.617.2) variant in Brazil
nCoV-2019 Genomic Epidemiology
1 2894 August 4, 2021
Emergence and spread of a B.1.1.28-derived lineage with Q675H and Q677H Spike mutations in Uruguay
SARS-CoV-2 coronavirus
1 2162 July 27, 2021
Real-time genomic surveillance during the 2021 re-emergence of the yellow fever virus in Rio Grande do Sul State, Brazil
Yellow fever virus
0 693 July 19, 2021
Emergence of a putative novel SARS-CoV-2 P.X lineage harboring N234P and E471Q spike protein mutations in Southern Brazil
nCoV-2019 Genomic Epidemiology
0 1016 July 14, 2021
Viral infection and transmission in a large well-traced outbreak caused by the Delta SARS-CoV-2 variant
nCoV-2019 Genomic Epidemiology
0 233093 July 7, 2021
Emergence and spread of SARS-CoV-2 P.1 (Gamma) lineage variants carrying Spike mutations 𝚫141-144, N679K or P681H during persistent viral circulation in Amazonas, Brazil
nCoV-2019 Genomic Epidemiology
0 4495 July 4, 2021
Preliminary in silico assessment of the specificity of published molecular assays and design of new assays using the available whole genome sequences of 2019-nCoV
nCoV-2019 Diagnostics and Vaccines
52 23610 June 21, 2021
Genomic Gymnastics in the Nucleocapsid Gene of SARS-CoV-2 During Transmission in Humans: Transposition of ACGAAC and Creation of the novel N2 Gene
SARS-CoV-2 Molecular Evolution
4 2320 June 18, 2021
Early appearance of two distinct genomic lineages of SARS-CoV-2 in different Wuhan wildlife markets suggests SARS-CoV-2 has a natural origin
SARS-CoV-2 coronavirus
3 24976 June 7, 2021
Recent evolution and international transmission of SARS-CoV-2 clade 19B (Pango A lineages)
SARS-CoV-2 Molecular Evolution
0 2686 June 2, 2021
RASCL: Rapid assessment of SARS-COV-2 clades enabled through molecular sequence analysis and its application to B.1.617.1 and B.1.617.2
SARS-CoV-2 Molecular Evolution
0 1896 May 28, 2021
First reported cases of SARS-CoV-2 sub-lineage B.1.617.2 in Brazil: an outbreak in a ship and alert for spread
SARS-CoV-2 coronavirus
0 3370 May 26, 2021
Spike protein sequences of Cambodian, Thai and Japanese bat sarbecoviruses provide insights into the natural evolution of the Receptor Binding Domain and S1/S2 cleavage site
1 14306 May 25, 2021