Topic Replies Views Activity
Phylodynamic Analysis | 176 genomes | 6 Mar 2020
nCoV-2019 Genomic Epidemiology

Phylogenetic analysis of nCoV-2019 genomes 6-Mar-2020 Andrew Rambaut, University of Edinburgh, Edinburgh UK a.rambaut@ed.ac.uk This is a brief report outlining a simple phylogenetic analysis of publicly shared genome…

17 123669 April 2, 2020
Linking Genotype to Phenotype: Further Exploration of Mutations in SARS-CoV-2 Associated with Mild or Severe Outcomes
SARS-CoV-2 coronavirus
0 1412 April 15, 2022
An APOBEC3 molecular clock to estimate the date of emergence of hMPXV
Evolution
0 1919 August 6, 2022
First Monkeypox virus sequence from northern Mexico
Genome Reports
0 1208 July 8, 2022
Monkeypox virus genome sequence from an imported case in Colombia
Genome Reports
0 1364 June 29, 2022
First monkeypox virus genome sequence from Brazil
Genome Reports
0 5846 June 9, 2022
Whole genome sequences of Monkey pox virus from two cases in Madrid, Spain, May-June 2022
Genome Reports
0 1297 June 24, 2022
A draft of the first genome sequence of Monkeypox virus associated with the multi-country outbreak in May 2022 from the Canary Islands, Spain
Genome Reports
4 2584 June 23, 2022
Monkeypox virus genome sequences from multiple lesions indicates co-infection of a UK returning traveller
Genome Reports
1 5156 June 23, 2022
Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus
Monkeypox
2 34407 June 22, 2022
Two draft Canadian monkeypox virus (MPXV) genomes, June 2022
Genome Reports
0 1401 June 21, 2022
MinIon-produced Illumina-confirmed genomes of the two first isolated cases from France
Genome Reports
0 1253 June 17, 2022
UPDATE: Two draft genomes from Madrid, Spain, of the Monkeypox virus 2022 outbreak
Genome Reports
0 1330 June 8, 2022
Illumina whole-genome sequence of Monkeypox virus in a patient travelling from the Canary Islands to France
Genome Reports
9 5021 June 13, 2022
MPXV intrahost variation in the context of APOBEC deamination: An initial look
Evolution
0 1152 June 13, 2022
First French draft genome sequence of Monkeypox virus, may 2022
Genome Reports
5 3665 June 9, 2022
Second draft genome from Spain of the Monkeypox virus 2022 outbreak
Genome Reports
0 1750 June 3, 2022
Update to observations about putative APOBEC3 deaminase editing in the light of new genomes from USA
Evolution
0 3426 June 5, 2022
Initial observations about putative APOBEC3 deaminase editing driving short-term evolution of MPXV since 2017
Evolution
6 18866 May 31, 2022
Travel-associated Monkeypox virus genomes from two German patients and of a derived virus isolate all closely related to a US sequence, 2022
Genome Reports
0 1318 June 3, 2022
First Israeli whole-genome sequence of Monkeypox virus associated with the May 2022 multi country outbreak
Genome Reports
0 1660 June 2, 2022
First 2022 monkeypox outbreak genome sequences from Slovenia
Genome Reports
0 2113 June 1, 2022
First available Monkeypox genome sequence from the first case in Italy related to multi-country outbreak in May 2022
Genome Reports
0 1884 May 31, 2022
Multi-country outbreak of Monkeypox virus: genetic divergence and first signs of microevolution
Genome Reports
7 33855 May 30, 2022
Rapid Establishment of Omicron Variant in Rio Grande do Sul State, Brazil
SARS-CoV-2 coronavirus
3 3382 May 30, 2022
Belgian case of Monkeypox virus linked to outbreak in Portugal
Genome Reports
5 19594 May 30, 2022
First Monkeypox genome sequence from the Netherlands
Genome Reports
0 2419 May 26, 2022
Spanish draft genome sequence of Monkeypox virus related to multi-country outbreak (May 2022)
Genome Reports
0 2285 May 27, 2022
First Monkeypox genome sequence from Italy
Genome Reports
0 2867 May 27, 2022
First German genome sequence of Monkeypox virus associated to multi-country outbreak in May 2022
Genome Reports
0 4648 May 24, 2022