|
Preliminary in silico assessment of the specificity of published molecular assays and design of new assays using the available whole genome sequences of 2019-nCoV
|
|
52
|
32921
|
June 21, 2021
|
|
Genomic Gymnastics in the Nucleocapsid Gene of SARS-CoV-2 During Transmission in Humans: Transposition of ACGAAC and Creation of the novel N2 Gene
|
|
4
|
6771
|
June 18, 2021
|
|
Early appearance of two distinct genomic lineages of SARS-CoV-2 in different Wuhan wildlife markets suggests SARS-CoV-2 has a natural origin
|
|
3
|
45775
|
June 7, 2021
|
|
Recent evolution and international transmission of SARS-CoV-2 clade 19B (Pango A lineages)
|
|
0
|
8170
|
June 2, 2021
|
|
RASCL: Rapid assessment of SARS-COV-2 clades enabled through molecular sequence analysis and its application to B.1.617.1 and B.1.617.2
|
|
0
|
4989
|
May 28, 2021
|
|
First reported cases of SARS-CoV-2 sub-lineage B.1.617.2 in Brazil: an outbreak in a ship and alert for spread
|
|
0
|
6939
|
May 26, 2021
|
|
Spike protein sequences of Cambodian, Thai and Japanese bat sarbecoviruses provide insights into the natural evolution of the Receptor Binding Domain and S1/S2 cleavage site
|
|
1
|
23143
|
May 25, 2021
|
|
Detection of Spike Mutations; D80G, T95I, G142D, △144, N439K, E484K, P681H, I1130V, and D1139H, in B.1.1.482 Lineage (AV.1) Samples from South Yorkshire, UK
|
|
1
|
11567
|
May 23, 2021
|
|
Spread of endemic SARS-CoV-2 lineages in Russia
|
|
2
|
9346
|
May 24, 2021
|
|
Identification of SARS-CoV-2 P.1-related lineages in Brazil provides new insights about the mechanisms of emergence of Variants of Concern
|
|
0
|
11361
|
May 16, 2021
|
|
Emergence of SARS-CoV-2 lineage A.27 in Germany, expressing viral spike proteins with several amino acid replacements of interest, including L18F, L452R, and N501Y in the absence of D614G
|
|
0
|
5843
|
May 14, 2021
|
|
Stepwise evolution and exceptional conservation of ORF1a/b overlap
|
|
0
|
3556
|
May 12, 2021
|
|
The ongoing evolution of variants of concern and interest of SARS-CoV-2 in Brazil revealed by convergent indels in the amino (N)-terminal domain of the Spike protein
|
|
3
|
14595
|
April 28, 2021
|
|
Novel sublineage within B.1.1.1 currently expanding in Peru and Chile, with a convergent deletion in the ORF1a gene (Δ3675-3677) and a novel deletion in the Spike gene (Δ246-252, G75V, T76I, L452Q, F490S, T859N)
|
|
2
|
33974
|
April 25, 2021
|
|
SARS-CoV-2 reinfection by the new Variant of Concern (VOC) P.1 in Amazonas, Brazil
|
|
3
|
68767
|
January 19, 2021
|
|
Outbreak.info: SARS-CoV-2 Mutation Situation Reports
|
|
2
|
11312
|
April 5, 2021
|
|
Release - 4 EBOV genomes from Guinea 2021 outbreak
|
|
0
|
13755
|
March 12, 2021
|
|
Phylogenetic and Recombination Analysis of SARS-CoV-2-like Viruses
|
|
1
|
8547
|
April 17, 2021
|
|
Detection of the recurrent substitution Q677H in the spike protein of SARS-CoV-2 in cases descended from the lineage B.1.429
|
|
0
|
7863
|
March 20, 2021
|
|
CoVizu: Rapid analysis and visualization of the global diversity of SARS-CoV-2 genomes
|
|
0
|
5823
|
April 12, 2021
|
|
Potential novel SARS-CoV-2 variant of interest from lineage AP.1 with N501Y and additional spike mutations identified in Saxony, Germany
|
|
0
|
9223
|
April 6, 2021
|
|
Increasing frequency of SARS-CoV-2 lineages B.1.1.7, P.1 and P.2 and identification of a novel lineage harboring E484Q and N501T spike mutations in Minas Gerais, Southeast Brazil
|
|
0
|
8113
|
April 8, 2021
|
|
Identification of a new B.1.1.33 SARS-CoV-2 Variant of Interest (VOI) circulating in Brazil with mutation E484K and multiple deletions in the amino (N)-terminal domain of the Spike protein
|
|
0
|
11671
|
April 6, 2021
|
|
Ready-to-use global platform for variant detection in SARS-CoV-2
|
|
0
|
3233
|
April 2, 2021
|
|
Global framework for SARS-CoV-2 data analysis: Application to intrahost variation | Part 2
|
|
1
|
6126
|
April 2, 2021
|
|
Detection of a large cluster and multiple introductions of the P.1 SARS-CoV-2 Variant of Concern in Massachusetts
|
|
0
|
9379
|
April 2, 2021
|
|
Genomic characterisation of sylvatic yellow fever virus epizootic in Trinidad
|
|
0
|
4570
|
March 29, 2021
|
|
Detection of the B.1.1.7 and B.1.351 SARS-CoV-2 variants in Bangladesh
|
|
0
|
6442
|
March 26, 2021
|
|
Assemblies of putative SARS-CoV2-spike-encoding mRNA sequences for vaccines BNT-162b2 and mRNA-1273
|
|
0
|
22251
|
March 24, 2021
|
|
Recombinant SARS-CoV-2 genomes involving lineage B.1.1.7 in the UK
|
|
0
|
28797
|
March 17, 2021
|